Gene: AT4G19560
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G19560
- Transcript Identifier AT4G19560.1
- Gene Type Coding gene
- Location Chr4 : 10661904-10664369 : positive
Gene Family Information
- ID HOM05D000604
- #Genes/#Species 936/100
- Phylogenetic origin
- ID ORTHO05D000990
- #Genes/#Species 527/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G19560.1
- symbol CYCT1%3B2
- uniprot Q56YF8
Descriptions
- Description Cyclin family protein
- Computational description CYCT1;2; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 2418 Blast hits to 2418 proteins in 249 species: Archae - 4; Bacteria - 2; Metazoa - 1390; Fungi - 391; Plants - 394; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IBA IEA | Gene Ontology | regulation of transcription by RNA polymerase II | 1 |
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
| GO:0032786 | IBA | Gene Ontology | positive regulation of DNA-templated transcription, elongation | 1 |
| GO:0045737 | IEA | GOA Database | positive regulation of cyclin-dependent protein serine/threonine kinase activity | |
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0007049 | IEA | GOA Database | cell cycle | |
| GO:0051301 | IEA | GOA Database | cell division | |
| GO:0007346 | ISO | PLAZA Integrative Orthology | regulation of mitotic cell cycle | Solyc09g075760.4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016538 | IBA IEA | Gene Ontology | cyclin-dependent protein serine/threonine kinase regulator activity | 1 |
| GO:0016538 | IEA | InterPro | cyclin-dependent protein serine/threonine kinase regulator activity | |
| GO:0061575 | IBA | Gene Ontology | cyclin-dependent protein serine/threonine kinase activator activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 1 |
| GO:0008024 | IBA | Gene Ontology | cyclin/CDK positive transcription elongation factor complex | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.1.1.1.9 | Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCT) |