Gene: AT4G17230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17230
  • Transcript Identifier AT4G17230.1
  • Gene Type Coding gene
  • Location Chr4 : 9661218-9662807 : negative

Gene Family Information

  • ID HOM05D000063
  • #Genes/#Species 3996/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17230.1
  • symbol SCL13
  • uniprot Q9M0M5

Descriptions

  • Description SCARECROW-like 13
  • Computational description SCARECROW-like 13 (SCL13); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: scarecrow-like 5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0009408
IEP
Gene Ontologyresponse to heat3
GO:0071456
HEP
Gene Ontologycellular response to hypoxia4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005202 Transcription factor GRAS
IPR030005 Scarecrow-like protein 13
Mapman id Description
15.5.12 RNA biosynthesis.transcriptional regulation.transcription factor (GRAS)