Gene: AT4G16640

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G16640
  • Transcript Identifier AT4G16640.1
  • Gene Type Coding gene
  • Location Chr4 : 9367396-9368490 : negative

Gene Family Information

  • ID HOM05D000502
  • #Genes/#Species 1063/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G16640.1
  • uniprot O23507

Descriptions

  • Description Matrixin family protein
  • Computational description Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT2G45040.1); Has 2701 Blast hits to 2501 proteins in 212 species: Archae - 6; Bacteria - 141; Metazoa - 2219; Fungi - 5; Plants - 183; Viruses - 44; Other Eukaryotes - 103 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis
GO:0030198
IBA
Gene Ontologyextracellular matrix organization1
GO:0030574
IBA
Gene Ontologycollagen catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004222
IEA
GOA Databasemetalloendopeptidase activity
GO:0004222
IDA
IBA
Gene Ontologymetalloendopeptidase activity1 2
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031012
IEA
Gene Ontologyextracellular matrix
GO:0031012
IEA
InterProextracellular matrix
GO:0031225
IEA
GOA Databaseanchored component of membrane
GO:0031225
TAS
Gene Ontologyanchored component of membrane3
GO:0016020
IEA
GOA Databasemembrane
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005886
IEA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036365 PGBD-like superfamily
IPR001818 Peptidase M10, metallopeptidase
IPR021190 Peptidase M10A
IPR006026 Peptidase, metallopeptidase
IPR002477 Peptidoglycan binding-like
IPR033739 Peptidase M10A, catalytic domain
IPR024079 Metallopeptidase, catalytic domain superfamily
Mapman id Description
19.4.5.3 Protein homeostasis.proteolysis.metallopeptidase activities.M10-class metalloprotease (Matrixin)