Gene: AT4G15980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15980
  • Transcript Identifier AT4G15980.2
  • Gene Type Coding gene
  • Location Chr4 : 9057466-9060013 : negative

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15980.2
  • uniprot O23447

Descriptions

  • Description Plant invertase/pectin methylesterase inhibitor superfamily
  • Computational description Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G49180.1); Has 11820 Blast hits to 6002 proteins in 917 species: Archae - 84; Bacteria - 4365; Metazoa - 2137; Fungi - 1021; Plants - 2480; Viruses - 33; Other Eukaryotes - 1700 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
Gene Ontologycell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0071555
IEA
GOA Databasecell wall organization
GO:0043086
IEA
GOA Databasenegative regulation of catalytic activity
GO:0045490
IEA
Gene Ontologypectin catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IBA
IEA
Gene Ontologypectinesterase activity1
GO:0030599
IEA
InterPropectinesterase activity
GO:0004857
IEA
Gene Ontologyenzyme inhibitor activity
GO:0004857
IEA
InterProenzyme inhibitor activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0046910
IBA
Gene Ontologypectinesterase inhibitor activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
GOA Databasecell wall
GO:0005576
IEA
GOA Databaseextracellular region
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006501 Pectinesterase inhibitor domain
IPR000070 Pectinesterase, catalytic
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase