Gene: AT4G15410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15410
  • Transcript Identifier AT4G15410.1
  • Gene Type Coding gene
  • Location Chr4 : 8814868-8816596 : positive

Gene Family Information

  • ID HOM05D002056
  • #Genes/#Species 323/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15410.1
  • symbol PUX5
  • uniprot Q7Y175

Descriptions

  • Description serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma
  • Computational description serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma (PUX5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061025
IBA
Gene Ontologymembrane fusion1
GO:0031468
IBA
Gene Ontologynuclear membrane reassembly1
GO:0043161
IBA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0007030
IBA
Gene OntologyGolgi organization1
GO:0000045
IBA
Gene Ontologyautophagosome assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding
GO:0051117
IPI
Gene OntologyATPase binding2
GO:0043130
IBA
Gene Ontologyubiquitin binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005829
HDA
IBA
Gene Ontologycytosol1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036241 NSFL1 cofactor p47, SEP domain superfamily
IPR039517 C6orf106, UBA-like domain
IPR029071 Ubiquitin-like domain superfamily
IPR001012 UBX domain
IPR009060 UBA-like superfamily
IPR012989 SEP domain
Mapman id Description
19.2.4.5.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.inner nuclear membrane-associated protein degradation (INMAD).substrate-to-CDC48 bridging factor (PUX3/4/5)