Gene: AT4G12650
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G12650
- Transcript Identifier AT4G12650.1
- Gene Type Coding gene
- Location Chr4 : 7468207-7470165 : negative
Gene Family Information
- ID HOM05D000238
- #Genes/#Species 1763/100
- Phylogenetic origin
- ID ORTHO05D001889
- #Genes/#Species 341/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G12650.1
- uniprot F4JRE0
Descriptions
- Description Endomembrane protein 70 protein family
- Computational description Endomembrane protein 70 protein family; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G35160.2); Has 1639 Blast hits to 1594 proteins in 317 species: Archae - 0; Bacteria - 7; Metazoa - 635; Fungi - 224; Plants - 501; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0072657 | IBA | Gene Ontology | protein localization to membrane | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | IDA IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 2 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IBA | Gene Ontology | membrane | 1 |
| GO:0005768 | IDA IEA | GOA Database | endosome | |
| GO:0005768 | HDA | Gene Ontology | endosome | 3 |
| GO:0005802 | IDA | GOA Database | trans-Golgi network | |
| GO:0005802 | HDA | Gene Ontology | trans-Golgi network | 3 |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 4 |
| GO:0005773 | IDA | GOA Database | vacuole | |
| GO:0005773 | HDA | Gene Ontology | vacuole | 5 |
| GO:0005774 | IDA | GOA Database | vacuolar membrane | |
| GO:0010008 | IEA | GOA Database | endosome membrane | |
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004240 | Nonaspanin (TM9SF) |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |