Gene: AT4G12210
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G12210
- Transcript Identifier AT4G12210.1
- Gene Type Coding gene
- Location Chr4 : 7281308-7281919 : negative
Gene Family Information
- ID HOM05D008302
- #Genes/#Species 61/13
- Phylogenetic origin
- ID ORTHO05D000038
- #Genes/#Species 3220/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G12210.1
- uniprot Q9STJ0
Descriptions
- Description RING/U-box superfamily protein
- Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G05350.1); Has 6768 Blast hits to 6717 proteins in 267 species: Archae - 0; Bacteria - 4; Metazoa - 1909; Fungi - 654; Plants - 3048; Viruses - 23; Other Eukaryotes - 1130 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IBA | Gene Ontology | protein ubiquitination | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | IBA | Gene Ontology | ubiquitin protein ligase activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |