Gene: AT4G04080
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G04080
- Transcript Identifier AT4G04080.1
- Gene Type Coding gene
- Location Chr4 : 1963386-1964308 : positive
Gene Family Information
- ID HOM05D002913
- #Genes/#Species 237/99
- Phylogenetic origin
- ID ORTHO05D003323
- #Genes/#Species 231/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G04080.1
- symbol ISU3
- Alias ATISU3,ISCU-LIKE 3
- uniprot O81433
Descriptions
- Description ISCU-like 3
- Computational description ISCU-like 3 (ISU3); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: SufE/NifU family protein (TAIR:AT4G22220.1); Has 5467 Blast hits to 5467 proteins in 1987 species: Archae - 110; Bacteria - 3663; Metazoa - 148; Fungi - 152; Plants - 89; Viruses - 0; Other Eukaryotes - 1305 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016226 | IGI IEA | Gene Ontology | iron-sulfur cluster assembly | 1 |
| GO:0016226 | IEA | InterPro | iron-sulfur cluster assembly | |
| GO:0006879 | IBA | Gene Ontology | cellular iron ion homeostasis | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding | |
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding | |
| GO:0005506 | IEA | GOA Database | iron ion binding | |
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0051537 | IEA | GOA Database | 2 iron, 2 sulfur cluster binding | |
| GO:0051537 | IBA | Gene Ontology | 2 iron, 2 sulfur cluster binding | 2 |
| GO:0008198 | IBA | Gene Ontology | ferrous iron binding | 2 |
| GO:0005198 | ISS | Gene Ontology | structural molecule activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005759 | IEA | GOA Database | mitochondrial matrix | |
| GO:0005759 | IBA | Gene Ontology | mitochondrial matrix | 2 |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | IDA | Gene Ontology | mitochondrion | 1 |
| GO:0009507 | IDA ISM | Gene Ontology | chloroplast | 1 |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 2 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 7.11.2.1.2 | Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.scaffold protein (ISU) |