Gene: AT4G01780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G01780
  • Transcript Identifier AT4G01780.1
  • Gene Type Coding gene
  • Location Chr4 : 767310-769246 : positive

Gene Family Information

  • ID HOM05D000537
  • #Genes/#Species 1018/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G01780.1
  • uniprot F4JG55

Descriptions

  • Description XH/XS domain-containing protein
  • Computational description XH/XS domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380), Domain of unknown function XH (InterPro:IPR005379); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT3G48670.2); Has 3523 Blast hits to 2927 proteins in 400 species: Archae - 106; Bacteria - 327; Metazoa - 1271; Fungi - 161; Plants - 347; Viruses - 11; Other Eukaryotes - 1300 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
IEA
Gene Ontologygene silencing by RNA
GO:0031047
IEA
InterProgene silencing by RNA

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005380 XS domain
IPR038588 XS domain superfamily
IPR005379 Uncharacterised domain XH
Mapman id Description
12.5.1.4 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.regulatory protein (IDN/IDP)