Gene: AT4G01540
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G01540
- Transcript Identifier AT4G01540.4
- Gene Type Coding gene
- Location Chr4 : 670920-672629 : negative
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D010977
- #Genes/#Species 42/12
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G01540.4
- symbol NTM1
- Alias ANAC068,Arabidopsis NAC domain containing protein 68
- uniprot A8MQY1
Descriptions
- Description NAC with transmembrane motif1
- Computational description NAC with transmembrane motif1 (NTM1); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 67 (TAIR:AT4G01520.1); Has 2751 Blast hits to 2734 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2749; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009736 | IMP | Gene Ontology | cytokinin-activated signaling pathway | 1 |
| GO:0009965 | IMP | Gene Ontology | leaf morphogenesis | 1 |
| GO:0045893 | IDA | Gene Ontology | positive regulation of transcription, DNA-templated | 1 |
| GO:0051302 | IMP | Gene Ontology | regulation of cell division | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | Gene Ontology | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 1 |
| GO:0005789 | IDA | Gene Ontology | endoplasmic reticulum membrane | 1 |
| GO:0031965 | IDA | Gene Ontology | nuclear membrane | 1 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |