Gene: AT4G01280
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G01280
- Transcript Identifier AT4G01280.1
- Gene Type Coding gene
- Location Chr4 : 535288-536854 : positive
Gene Family Information
- ID HOM05D001414
- #Genes/#Species 444/95
- Phylogenetic origin
- ID ORTHO05D000619
- #Genes/#Species 733/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G01280.1
- uniprot C0SVG5
Descriptions
- Description Homeodomain-like superfamily protein
- Computational description Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G01520.1); Has 1285 Blast hits to 1273 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 0; Plants - 1033; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 1 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |