Gene: AT4G00180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G00180
  • Transcript Identifier AT4G00180.1
  • Gene Type Coding gene
  • Location Chr4 : 72804-75089 : negative

Gene Family Information

  • ID HOM05D000685
  • #Genes/#Species 834/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G00180.1
  • symbol YAB3
  • full_name YABBY3
  • uniprot Q9XFB1

Descriptions

  • Description Plant-specific transcription factor YABBY family protein
  • Computational description YABBY3 (YAB3); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT2G45190.1); Has 469 Blast hits to 469 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 442; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045165
IBA
Gene Ontologycell fate commitment1
GO:0007275
IEA
InterPromulticellular organism development
GO:0010158
IGI
IBA
Gene Ontologyabaxial cell fate specification1 2
GO:1902183
IMP
IBA
Gene Ontologyregulation of shoot apical meristem development1 3
GO:0009944
IMP
IBA
Gene Ontologypolarity specification of adaxial/abaxial axis1 3
GO:2000024
IMP
IBA
Gene Ontologyregulation of leaf development1 3
GO:0010154
IMP
IBA
Gene Ontologyfruit development1 2
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding5
GO:0005515
IPI
Gene Ontologyprotein binding6
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036910 High mobility group box domain superfamily
IPR006780 YABBY protein
Mapman id Description
15.5.1.4 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (YABBY)