Gene: AT3G63400
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G63400
- Transcript Identifier AT3G63400.1
- Gene Type Coding gene
- Location Chr3 : 23412449-23415435 : positive
Gene Family Information
- ID HOM05D000144
- #Genes/#Species 2569/100
- Phylogenetic origin
- ID ORTHO05D000392
- #Genes/#Species 1007/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G63400.1
- uniprot Q9LY75
Descriptions
- Description Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
- Computational description Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 55912 Blast hits to 37431 proteins in 3034 species: Archae - 126; Bacteria - 11048; Metazoa - 23197; Fungi - 5408; Plants - 3603; Viruses - 370; Other Eukaryotes - 12160 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000413 | IEA | GOA Database | protein peptidyl-prolyl isomerization | |
| GO:0000413 | IBA | Gene Ontology | protein peptidyl-prolyl isomerization | 1 |
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization | |
| GO:0006457 | IEA | GOA Database | protein folding | |
| GO:0006457 | IBA | Gene Ontology | protein folding | 1 |
| GO:0008380 | NAS | Gene Ontology | RNA splicing | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003755 | IEA | GOA Database | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0003755 | IBA | Gene Ontology | peptidyl-prolyl cis-trans isomerase activity | 1 |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0016018 | IBA | Gene Ontology | cyclosporin A binding | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005654 | IEA | GOA Database | nucleoplasm | |
| GO:0016607 | IEA | GOA Database | nuclear speck | |
| GO:0005737 | ISM, IBA | Gene Ontology | cytoplasm | 1 |
| GO:0005829 | RCA | Gene Ontology | cytosol | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.13.1 | Protein modification.protein folding.protein folding catalyst (Cyclophilin) |