Gene: AT3G62090

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G62090
  • Transcript Identifier AT3G62090.1
  • Gene Type Coding gene
  • Location Chr3 : 22989097-22990495 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid AT3G62090.1
  • symbol PIL2
  • Alias PIF6,PHYTOCHROME-INTERACTING FACTOR 6
  • uniprot Q8L5W7

Descriptions

  • Description phytochrome interacting factor 3-like 2
  • Computational description phytochrome interacting factor 3-like 2 (PIL2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: red or far-red light signaling pathway; LOCATED IN: nucleus; EXPRESSED IN: stem, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 1 (TAIR:AT2G46970.1); Has 1467 Blast hits to 1461 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1464; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010017
IEP
Gene Ontologyred or far-red light signaling pathway1
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity2
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR031066 Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)