Gene: AT3G61470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G61470
  • Transcript Identifier AT3G61470.1
  • Gene Type Coding gene
  • Location Chr3 : 22745736-22747032 : positive

Gene Family Information

  • ID HOM05D000133
  • #Genes/#Species 2666/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G61470.1
  • symbol LHCA2
  • full_name photosystem I light harvesting complex gene 2
  • uniprot Q9SYW8

Descriptions

  • Description photosystem I light harvesting complex protein
  • Computational description photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0018298
IEA
GOA Databaseprotein-chromophore linkage
GO:0009765
IEA
GOA Databasephotosynthesis, light harvesting
GO:0009765
IEA
InterProphotosynthesis, light harvesting
GO:0009768
IDA
IBA
TAS
Gene Ontologyphotosynthesis, light harvesting in photosystem I1 2
GO:0009409
IEP
Gene Ontologyresponse to cold3
GO:0009644
IEP
Gene Ontologyresponse to high light intensity3
GO:0009645
IEP
Gene Ontologyresponse to low light intensity stimulus3
GO:0009416
IBA
Gene Ontologyresponse to light stimulus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0019904
IPI
GOA Databaseprotein domain specific binding
GO:0016168
IEA
GOA Databasechlorophyll binding
GO:0016168
ISS
Gene Ontologychlorophyll binding
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
IDA, HDA
IBA
Gene Ontologychloroplast thylakoid membrane2 5 6
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast7
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid8
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid9
GO:0009522
IEA
GOA Databasephotosystem I
GO:0009536
IEA
GOA Databaseplastid
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0009782
TAS
Gene Ontologyphotosystem I antenna complex
GO:0005829
HDA
Gene Ontologycytosol10

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023329 Chlorophyll a/b binding domain superfamily
IPR022796 Chlorophyll A-B binding protein
IPR001344 Chlorophyll A-B binding protein, plant and chromista
Mapman id Description
1.1.4.1.2 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.component LHCa2