Gene: AT3G61220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G61220
  • Transcript Identifier AT3G61220.1
  • Gene Type Coding gene
  • Location Chr3 : 22663025-22664316 : positive

Gene Family Information

  • ID HOM05D000402
  • #Genes/#Species 1251/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G61220.1
  • symbol SDR1
  • full_name short-chain dehydrogenase/reductase 1
  • uniprot Q9M2E2

Descriptions

  • Description NAD(P)-binding Rossmann-fold superfamily protein
  • Computational description NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, (-)-menthol dehydrogenase activity, ( )-neomenthol dehydrogenase activity; INVOLVED IN: response to karrikin, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G24190.1); Has 78247 Blast hits to 78183 proteins in 3234 species: Archae - 733; Bacteria - 53633; Metazoa - 4843; Fungi - 3816; Plants - 2340; Viruses - 0; Other Eukaryotes - 12882 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
IMP
Gene Ontologydefense response1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
Gene Ontologyoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0047501
IDA
IEA
Gene Ontology(+)-neomenthol dehydrogenase activity1
GO:0047504
IDA
Gene Ontology(-)-menthol dehydrogenase activity1
GO:0008106
IDA
Gene Ontologyalcohol dehydrogenase (NADP+) activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005886
HDA
Gene Ontologyplasma membrane3
GO:0005829
IDA, HDA
Gene Ontologycytosol2 4
GO:0016020
IBA
Gene Ontologymembrane5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036291 NAD(P)-binding domain superfamily
IPR002347 Short-chain dehydrogenase/reductase SDR
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor