Gene: AT3G60080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G60080
  • Transcript Identifier AT3G60080.1
  • Gene Type Coding gene
  • Location Chr3 : 22187635-22188555 : positive

Gene Family Information

  • ID HOM05D000082
  • #Genes/#Species 3688/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G60080.1
  • uniprot Q9M1D5

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G44330.1); Has 9920 Blast hits to 9845 proteins in 282 species: Archae - 0; Bacteria - 98; Metazoa - 2725; Fungi - 927; Plants - 4887; Viruses - 7; Other Eukaryotes - 1276 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process1
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1
GO:0061630
IEA
InterProubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR039525 E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon
Mapman id Description
35.1 not assigned.annotated