Gene: AT3G59980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G59980
  • Transcript Identifier AT3G59980.1
  • Gene Type Coding gene
  • Location Chr3 : 22154528-22155570 : negative

Gene Family Information

  • ID HOM05D001184
  • #Genes/#Species 526/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G59980.1
  • uniprot Q9M1X8

Descriptions

  • Description Nucleic acid-binding, OB-fold-like protein
  • Computational description Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 5867 Blast hits to 5867 proteins in 2108 species: Archae - 266; Bacteria - 4355; Metazoa - 277; Fungi - 157; Plants - 151; Viruses - 0; Other Eukaryotes - 661 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0000049
IEA
GOA DatabasetRNA binding
GO:0000049
IEA
InterProtRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast1
GO:0005829
HDA
Gene Ontologycytosol2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR002547 tRNA-binding domain
Mapman id Description
35.1 not assigned.annotated