Gene: AT3G59690

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G59690
  • Transcript Identifier AT3G59690.1
  • Gene Type Coding gene
  • Location Chr3 : 22049572-22051479 : positive

Gene Family Information

  • ID HOM05D000156
  • #Genes/#Species 2379/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G59690.1
  • symbol IQD13
  • uniprot Q9M199

Descriptions

  • Description IQ-domain 13
  • Computational description IQ-domain 13 (IQD13); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 14 (TAIR:AT2G43680.1); Has 1694 Blast hits to 1201 proteins in 100 species: Archae - 0; Bacteria - 16; Metazoa - 93; Fungi - 40; Plants - 1224; Viruses - 44; Other Eukaryotes - 277 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000652
IMP
GOA Databaseregulation of secondary cell wall biogenesis
GO:0009834
IMP
GOA Databaseplant-type secondary cell wall biogenesis
GO:0010089
IMP
GOA Databasexylem development

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005886
IDA
IEA
GOA Databaseplasma membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005737
IEA
GOA Databasecytoplasm
GO:0055028
IDA
GOA Databasecortical microtubule

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025064 Domain of unknown function DUF4005
IPR000048 IQ motif, EF-hand binding site
Mapman id Description
20.6.2 Cytoskeleton organisation.cytoskeleton-plasma membrane-cell wall interface.microtubule - plasma membrane linkage regulator (IQD13)