Gene: AT3G59540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G59540
  • Transcript Identifier AT3G59540.1
  • Gene Type Coding gene
  • Location Chr3 : 21995897-21996742 : negative

Gene Family Information

  • ID HOM05D001295
  • #Genes/#Species 485/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G59540.1

Descriptions

  • Description Ribosomal L38e protein family
  • Computational description Ribosomal L38e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L38e (InterPro:IPR002675); BEST Arabidopsis thaliana protein match is: Ribosomal L38e protein family (TAIR:AT2G43460.1); Has 621 Blast hits to 621 proteins in 253 species: Archae - 3; Bacteria - 0; Metazoa - 265; Fungi - 127; Plants - 120; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0022625
HDA
Gene Ontologycytosolic large ribosomal subunit1
GO:0005829
HDA
Gene Ontologycytosol2
GO:0005840
IEA
InterProribosome
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G43460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002675 Ribosomal protein L38e
IPR038464 Ribosomal protein L38e superfamily
Mapman id Description
17.1.2.1.41 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL38