Gene: AT3G58100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G58100
  • Transcript Identifier AT3G58100.2
  • Gene Type Coding gene
  • Location Chr3 : 21515397-21516557 : negative

Gene Family Information

  • ID HOM05D000020
  • #Genes/#Species 6649/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G58100.2
  • symbol PDCB5
  • uniprot Q9M2K6

Descriptions

  • Description plasmodesmata callose-binding protein 5
  • Computational description plasmodesmata callose-binding protein 5 (PDCB5); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT1G29380.1); Has 1455 Blast hits to 1408 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 65; Plants - 1390; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0005975
ISO
PLAZA Homology (enrichment)carbohydrate metabolic process HOM05D000020

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001872
ISS
Gene Ontology(1->3)-beta-D-glucan binding1
GO:0030247
ISS
Gene Ontologypolysaccharide binding1
GO:0004553
ISO
PLAZA Homology (enrichment)hydrolase activity, hydrolyzing O-glycosyl compounds HOM05D000020

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0031225
IEA
GOA Databaseanchored component of membrane
GO:0031225
TAS
Gene Ontologyanchored component of membrane2
GO:0046658
HDA
Gene Ontologyanchored component of plasma membrane3
GO:0009506
IEA
GOA Databaseplasmodesma
GO:0009506
IDA
Gene Ontologyplasmodesma1
GO:0016020
IEA
GOA Databasemembrane
GO:0030054
IEA
GOA Databasecell junction

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012946 X8 domain
IPR044788 Carbohydrate-binding X8 domain-containing protein, plant
Mapman id Description
35.1 not assigned.annotated