Gene: AT3G58070
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G58070
- Transcript Identifier AT3G58070.1
- Gene Type Coding gene
- Location Chr3 : 21506845-21507606 : negative
Gene Family Information
- ID HOM05D003047
- #Genes/#Species 226/87
- Phylogenetic origin
- ID ORTHO05D000627
- #Genes/#Species 728/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G58070.1
- symbol GIS
- full_name GLABROUS INFLORESCENCE STEMS
- uniprot Q84WI0
Descriptions
- Description C2H2 and C2HC zinc fingers superfamily protein
- Computational description GLABROUS INFLORESCENCE STEMS (GIS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, trichome branching, response to gibberellin stimulus, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 8 (TAIR:AT2G41940.1); Has 936 Blast hits to 936 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 934; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009740 | IEA | GOA Database | gibberellic acid mediated signaling pathway | |
GO:0010090 | IEA | GOA Database | trichome morphogenesis | |
GO:0010090 | IEA | InterPro | trichome morphogenesis | |
GO:0010026 | IEA | GOA Database | trichome differentiation | |
GO:0010026 | IMP | Gene Ontology | trichome differentiation | 1 |
GO:0010026 | IEA | InterPro | trichome differentiation | |
GO:0009739 | IEA | GOA Database | response to gibberellin | |
GO:0009739 | IMP | Gene Ontology | response to gibberellin | 1 |
GO:0009739 | IEA | InterPro | response to gibberellin | |
GO:0030154 | IEA | GOA Database | cell differentiation | |
GO:0010091 | IMP | Gene Ontology | trichome branching | 1 |
GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 2 |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 4 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.15 | RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF) |