Gene: AT3G56110
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G56110
- Transcript Identifier AT3G56110.2
- Gene Type Coding gene
- Location Chr3 : 20822228-20822857 : negative
Gene Family Information
- ID HOM05D000490
- #Genes/#Species 1087/98
- Phylogenetic origin
- ID ORTHO05D001398
- #Genes/#Species 415/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G56110.2
- symbol PRA1.B1
- uniprot Q9LYN0
Descriptions
- Description prenylated RAB acceptor 1.B1
- Computational description prenylated RAB acceptor 1.B1 (PRA1.B1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B2 (TAIR:AT2G40380.1); Has 577 Blast hits to 577 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 114; Plants - 309; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
- Computational description prenylated RAB acceptor 1.B1 (PRA1.B1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.B2 (TAIR:AT2G40380.1).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | IDA IBA | Gene Ontology | vesicle-mediated transport | 1 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISM | Gene Ontology | plasma membrane | |
| GO:0005783 | IDA IBA | Gene Ontology | endoplasmic reticulum | 1 2 |
| GO:0005794 | IDA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA IBA | Gene Ontology | Golgi apparatus | 2 3 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 4 |
| GO:0000138 | HDA | Gene Ontology | Golgi trans cisterna | 5 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IBA | Gene Ontology | membrane | 2 |
| GO:0010008 | IEA | GOA Database | endosome membrane | |
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004895 | Prenylated rab acceptor PRA1 |
| Mapman id | Description |
|---|---|
| 22.3.4.4.3.2 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GDI displacement factor (GDF) activities.B-G-class Rab-GDF protein |