Gene: AT3G55970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55970
  • Transcript Identifier AT3G55970.1
  • Gene Type Coding gene
  • Location Chr3 : 20766970-20769264 : negative

Gene Family Information

  • ID HOM05D000018
  • #Genes/#Species 7046/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55970.1
  • symbol JRG21
  • Alias ATJRG21
  • uniprot Q9LY48

Descriptions

  • Description jasmonate-regulated gene 21
  • Computational description jasmonate-regulated gene 21 (JRG21); FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8809 Blast hits to 8750 proteins in 1005 species: Archae - 0; Bacteria - 1115; Metazoa - 109; Fungi - 1073; Plants - 4993; Viruses - 0; Other Eukaryotes - 1519 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900150
IMP
Gene Ontologyregulation of defense response to fungus1
GO:1900366
IMP
Gene Ontologynegative regulation of defense response to insect1
GO:2000022
IGI
Gene Ontologyregulation of jasmonic acid mediated signaling pathway1
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0120091
IDA, IGI
Gene Ontologyjasmonic acid hydrolase1
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0051213
IBA
Gene Ontologydioxygenase activity2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0005506
ISS
GOA Databaseiron ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027443 Isopenicillin N synthase-like superfamily
IPR026992 Non-haem dioxygenase N-terminal domain
IPR044861 Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain
Mapman id Description
50.1.13 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen