Gene: AT3G55500

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55500
  • Transcript Identifier AT3G55500.1
  • Gene Type Coding gene
  • Location Chr3 : 20575073-20576102 : negative

Gene Family Information

  • ID HOM05D000114
  • #Genes/#Species 2914/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55500.1
  • symbol EXPA16
  • Alias ATEXP16,ATEXPA16,expansin A16,ATHEXP ALPHA 1.7,EXP16,EXPANSIN 16
  • uniprot Q9M2S9

Descriptions

  • Description expansin A16
  • Computational description expansin A16 (EXPA16); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2167 Blast hits to 2164 proteins in 159 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 38; Plants - 2087; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009664
IEA
Gene Ontologyplant-type cell wall organization
GO:0009664
IEA
InterProplant-type cell wall organization
GO:0009826
NAS
Gene Ontologyunidimensional cell growth1
GO:0009828
NAS
Gene Ontologyplant-type cell wall loosening1
GO:0006949
IEP
Gene Ontologysyncytium formation2
GO:0071555
IEA
GOA Databasecell wall organization

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005576
IEA
InterProextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036749 Expansin, cellulose-binding-like domain superfamily
IPR036908 RlpA-like domain superfamily
IPR007118 Expansin/Lol pI
IPR002963 Expansin
IPR009009 RlpA-like protein, double-psi beta-barrel domain
IPR007112 Expansin/pollen allergen, DPBB domain
IPR007117 Expansin, cellulose-binding-like domain
Mapman id Description
21.4.2.1 Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin