Gene: AT3G55350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55350
  • Transcript Identifier AT3G55350.1
  • Gene Type Coding gene
  • Location Chr3 : 20518518-20520690 : positive

Gene Family Information

  • ID HOM05D000953
  • #Genes/#Species 628/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55350.1
  • uniprot Q9M2U3

Descriptions

  • Description PIF / Ping-Pong family of plant transposase
  • Computational description PIF / Ping-Pong family of plant transposases; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G63270.1); Has 1213 Blast hits to 1213 proteins in 135 species: Archae - 0; Bacteria - 2; Metazoa - 520; Fungi - 50; Plants - 592; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004518
IEA
GOA Databasenuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027806 Harbinger transposase-derived nuclease domain
Mapman id Description
35.1 not assigned.annotated