Gene: AT3G55020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55020
  • Transcript Identifier AT3G55020.3
  • Gene Type Coding gene
  • Location Chr3 : 20389628-20394713 : negative

Gene Family Information

  • ID HOM05D001127
  • #Genes/#Species 547/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55020.3
  • uniprot F4JF82

Descriptions

  • Description Ypt/Rab-GAP domain of gyp1p superfamily protein
  • Computational description Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G39280.1); Has 8291 Blast hits to 7654 proteins in 526 species: Archae - 15; Bacteria - 632; Metazoa - 4273; Fungi - 1225; Plants - 609; Viruses - 33; Other Eukaryotes - 1504 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IBA
Gene Ontologyintracellular protein transport1
GO:0090630
IBA
Gene Ontologyactivation of GTPase activity1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IBA
Gene OntologyGTPase activator activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035969 Rab-GTPase-TBC domain superfamily
IPR000195 Rab-GTPase-TBC domain
Mapman id Description
22.3.4.2.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activation.RAB-GTPase-activating protein (RAB-GAP)