Gene: AT3G54380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54380
  • Transcript Identifier AT3G54380.3
  • Gene Type Coding gene
  • Location Chr3 : 20133985-20136378 : negative

Gene Family Information

  • ID HOM05D002494
  • #Genes/#Species 273/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54380.3
  • symbol SAC3C
  • Alias AtSAC3C
  • full_name yeast Sac3 homolog C
  • uniprot Q67XV2

Descriptions

  • Description SAC3/GANP/Nin1/mts3/eIF-3 p25 family
  • Computational description SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1); Has 539 Blast hits to 535 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 200; Plants - 96; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
  • Computational description SAC3/GANP/Nin1/mts3/eIF-3 p25 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006406
IBA
Gene OntologymRNA export from nucleus1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0070390
IBA
Gene Ontologytranscription export complex 21

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045107 SAC3/GANP/THP3
IPR005062 SAC3/GANP/THP3, conserved domain
Mapman id Description
16.10.2.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.scaffold component GANP/SAC3