Gene: AT3G53850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53850
  • Transcript Identifier AT3G53850.1
  • Gene Type Coding gene
  • Location Chr3 : 19948262-19948994 : negative

Gene Family Information

  • ID HOM05D000663
  • #Genes/#Species 862/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53850.1
  • Alias CASPL5B2,CASP-like protein 5B2
  • uniprot Q945M8

Descriptions

  • Description Uncharacterized protein family (UPF0497)
  • Computational description Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G02060.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane1
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006702 Casparian strip membrane protein domain
IPR045009 CASP-like protein 5
Mapman id Description
35.1 not assigned.annotated