Gene: AT3G53780
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G53780
- Transcript Identifier AT3G53780.2
- Gene Type Coding gene
- Location Chr3 : 19924729-19926648 : negative
Gene Family Information
- ID HOM05D000659
- #Genes/#Species 863/98
- Phylogenetic origin
- ID ORTHO05D000505
- #Genes/#Species 840/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G53780.2
- symbol RBL4
- Alias ATRBL4,RHOMBOID-like protein 4
- uniprot F4JBM4
Descriptions
- Description RHOMBOID-like protein 4
- Computational description RHOMBOID-like protein 4 (RBL4); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 1 (TAIR:AT2G29050.1); Has 6501 Blast hits to 6500 proteins in 1879 species: Archae - 139; Bacteria - 4229; Metazoa - 522; Fungi - 151; Plants - 328; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink).
- Computational description RHOMBOID-like protein 4 (RBL4); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 1 (TAIR:AT2G29050.1); Has 6556 Blast hits to 6555 proteins in 1887 species: Archae - 139; Bacteria - 4263; Metazoa - 519; Fungi - 151; Plants - 328; Viruses - 0; Other Eukaryotes - 1156 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006508 | IEA | InterPro | proteolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004252 | IEA | Gene Ontology | serine-type endopeptidase activity | |
| GO:0004252 | IEA | InterPro | serine-type endopeptidase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0008233 | IEA | GOA Database | peptidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 1 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005886 | IDA | GOA Database | plasma membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.4.2.6 | Protein homeostasis.proteolysis.serine-type peptidase activities.S54-class protease (RBL)) |