Gene: AT3G49350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G49350
  • Transcript Identifier AT3G49350.1
  • Gene Type Coding gene
  • Location Chr3 : 18297663-18299846 : negative

Gene Family Information

  • ID HOM05D002162
  • #Genes/#Species 310/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G49350.1
  • uniprot Q4V3B4

Descriptions

  • Description Ypt/Rab-GAP domain of gyp1p superfamily protein
  • Computational description Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G24390.1); Has 4289 Blast hits to 3657 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2316; Fungi - 775; Plants - 693; Viruses - 0; Other Eukaryotes - 505 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IBA
Gene Ontologyintracellular protein transport1
GO:0090630
IBA
Gene Ontologyactivation of GTPase activity1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IBA
Gene OntologyGTPase activator activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000195 Rab-GTPase-TBC domain
IPR035969 Rab-GTPase-TBC domain superfamily
Mapman id Description
22.3.4.2.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activation.RAB-GTPase-activating protein (RAB-GAP)