Gene: AT3G48610
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G48610
- Transcript Identifier AT3G48610.1
- Gene Type Coding gene
- Location Chr3 : 18011653-18013959 : negative
Gene Family Information
- ID HOM05D000804
- #Genes/#Species 734/100
- Phylogenetic origin
- ID ORTHO05D000989
- #Genes/#Species 527/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G48610.1
- symbol NPC6
- uniprot Q8H965
Descriptions
- Description non-specific phospholipase C6
- Computational description non-specific phospholipase C6 (NPC6); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2244 Blast hits to 2129 proteins in 399 species: Archae - 32; Bacteria - 1880; Metazoa - 0; Fungi - 127; Plants - 152; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009395 | IDA IBA | Gene Ontology | phospholipid catabolic process | 1 2 |
| GO:0048229 | IGI | Gene Ontology | gametophyte development | 2 |
| GO:0048364 | IGI | Gene Ontology | root development | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004629 | IDA | Gene Ontology | phospholipase C activity | 2 |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016788 | IEA | GOA Database | hydrolase activity, acting on ester bonds | |
| GO:0016788 | IEA | InterPro | hydrolase activity, acting on ester bonds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISM | Gene Ontology | plasma membrane | |
| GO:0009507 | IDA | Gene Ontology | chloroplast | 2 |
| GO:0005576 | IEA | GOA Database | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.7.2.3.1 | Lipid metabolism.lipid degradation.phospholipase activities.phospholipase C activities.phospholipase C (nPLC) |