Gene: AT3G47780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G47780
  • Transcript Identifier AT3G47780.1
  • Gene Type Coding gene
  • Location Chr3 : 17624500-17628972 : positive

Gene Family Information

  • ID HOM05D000610
  • #Genes/#Species 929/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G47780.1
  • symbol ABCA7
  • Alias ATATH6,A. THALIANA ABC2 HOMOLOG 6,ATH6,ABC2 homolog 6
  • full_name ATP-binding cassette A7
  • uniprot Q9STT5

Descriptions

  • Description ABC2 homolog 6
  • Computational description ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
Gene Ontologytransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006869
IBA
Gene Ontologylipid transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
Gene OntologyABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005319
IBA
Gene Ontologylipid transporter activity1
GO:0042626
ISS, IBA
Gene OntologyATPase-coupled transmembrane transporter activity1
GO:0022857
ISS
Gene Ontologytransmembrane transporter activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026082 ABC transporter A
IPR003439 ABC transporter-like, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
Mapman id Description
24.1.3.2.1 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCA transporter