Gene: AT3G47540
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G47540
- Transcript Identifier AT3G47540.1
- Gene Type Coding gene
- Location Chr3 : 17521044-17521997 : positive
Gene Family Information
- ID HOM05D000242
- #Genes/#Species 1731/97
- Phylogenetic origin
- ID ORTHO05D000631
- #Genes/#Species 725/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G47540.1
- uniprot Q9SN84
Descriptions
- Description Chitinase family protein
- Computational description Chitinase family protein; FUNCTIONS IN: chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 1501 Blast hits to 1495 proteins in 261 species: Archae - 0; Bacteria - 181; Metazoa - 9; Fungi - 3; Plants - 1299; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005975 | IEA | Gene Ontology | carbohydrate metabolic process | |
GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
GO:0006032 | IEA | Gene Ontology | chitin catabolic process | |
GO:0006032 | IEA | InterPro | chitin catabolic process | |
GO:0016998 | IEA | Gene Ontology | cell wall macromolecule catabolic process | |
GO:0016998 | IEA | InterPro | cell wall macromolecule catabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004568 | IBA IEA | Gene Ontology | chitinase activity | 1 |
GO:0004568 | IEA | InterPro | chitinase activity | |
GO:0008061 | ISO | PLAZA Homology (enrichment) | chitin binding | HOM05D000242 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005576 | ISM | Gene Ontology | extracellular region |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |