Gene: AT3G42170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G42170
  • Transcript Identifier AT3G42170.1
  • Gene Type Coding gene
  • Location Chr3 : 14321838-14323928 : positive

Gene Family Information

  • ID HOM05D000030
  • #Genes/#Species 5403/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G42170.1
  • symbol DAYSLEEPER
  • uniprot Q9M2N5

Descriptions

  • Description BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER
  • Computational description BED zinc finger ;hAT family dimerisation domain; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656); BEST Arabidopsis thaliana protein match is: BED zinc finger ;hAT family dimerisation domain (TAIR:AT1G18560.1); Has 1233 Blast hits to 1128 proteins in 97 species: Archae - 0; Bacteria - 4; Metazoa - 232; Fungi - 219; Plants - 755; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009791
IMP
Gene Ontologypost-embryonic development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IPI
Gene OntologyDNA binding1
GO:0003677
IEA
InterProDNA binding
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025525 hAT-like transposase, RNase-H fold
IPR036236 Zinc finger C2H2 superfamily
IPR008906 HAT, C-terminal dimerisation domain
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated