Gene: AT3G29250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G29250
  • Transcript Identifier AT3G29250.3
  • Gene Type Coding gene
  • Location Chr3 : 11193767-11194948 : negative

Gene Family Information

  • ID HOM05D000182
  • #Genes/#Species 2098/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G29250.3
  • symbol SDR4
  • Alias AtSDR4
  • full_name short-chain dehydrogenase reductase 4
  • uniprot F4J2Z7

Descriptions

  • Description NAD(P)-binding Rossmann-fold superfamily protein
  • Computational description NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29260.1); Has 117310 Blast hits to 117106 proteins in 3562 species: Archae - 953; Bacteria - 77625; Metazoa - 4727; Fungi - 6379; Plants - 2526; Viruses - 6; Other Eukaryotes - 25094 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005507
HDA
Gene Ontologycopper ion binding1
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated