Gene: AT3G28910

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G28910
  • Transcript Identifier AT3G28910.1
  • Gene Type Coding gene
  • Location Chr3 : 10911443-10912856 : positive

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G28910.1
  • symbol MYB30
  • Alias ATMYB30
  • uniprot Q9SCU7

Descriptions

  • Description myb domain protein 30
  • Computational description myb domain protein 30 (MYB30); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 9437 Blast hits to 8283 proteins in 550 species: Archae - 0; Bacteria - 9; Metazoa - 928; Fungi - 510; Plants - 5797; Viruses - 10; Other Eukaryotes - 2183 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006952
IEA
GOA Databasedefense response
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0009733
IBA
Gene Ontologyresponse to auxin1
GO:0009644
IMP
Gene Ontologyresponse to high light intensity2
GO:0010100
IMP
Gene Ontologynegative regulation of photomorphogenesis3
GO:0001666
IMP
Gene Ontologyresponse to hypoxia4
GO:0042761
IMP
Gene Ontologyvery long-chain fatty acid biosynthetic process5
GO:0009626
IEP
Gene Ontologyplant-type hypersensitive response6
GO:0009617
IEP
Gene Ontologyresponse to bacterium6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity3 6
GO:0003677
IEA
GOA DatabaseDNA binding
GO:1990837
IDA
Gene Ontologysequence-specific double-stranded DNA binding3
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding7
GO:0005515
IPI
Gene Ontologyprotein binding8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)