Gene: AT3G28900
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G28900
- Transcript Identifier AT3G28900.1
- Gene Type Coding gene
- Location Chr3 : 10902864-10904415 : negative
Gene Family Information
- ID HOM05D000532
- #Genes/#Species 1024/100
- Phylogenetic origin
- ID ORTHO05D001528
- #Genes/#Species 393/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G28900.1
- uniprot Q9LJW6
Descriptions
- Description Ribosomal protein L34e superfamily protein
- Computational description Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 932 Blast hits to 932 proteins in 308 species: Archae - 48; Bacteria - 0; Metazoa - 298; Fungi - 143; Plants - 198; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | Gene Ontology | translation | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0042254 | IBA | Gene Ontology | ribosome biogenesis | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IDA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IBA | Gene Ontology | structural constituent of ribosome | 1 |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042788 | IDA | GOA Database | polysomal ribosome | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0022626 | IDA | GOA Database | cytosolic ribosome | |
| GO:0022626 | HDA | Gene Ontology | cytosolic ribosome | 3 |
| GO:0022625 | IDA | GOA Database | cytosolic large ribosomal subunit | |
| GO:0022625 | HDA IBA | Gene Ontology | cytosolic large ribosomal subunit | 1 4 |
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008195 | Ribosomal protein L34Ae |
| Mapman id | Description |
|---|---|
| 17.1.2.1.34 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL34 |