Gene: AT3G28660

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G28660
  • Transcript Identifier AT3G28660.1
  • Gene Type Coding gene
  • Location Chr3 : 10739400-10740914 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G28660.1
  • uniprot Q9LJI9

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G28640.1); Has 30916 Blast hits to 12747 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 48; Fungi - 39; Plants - 30416; Viruses - 0; Other Eukaryotes - 411 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
IBA
Gene OntologyRNA modification1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated