Gene: AT3G28180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G28180
  • Transcript Identifier AT3G28180.1
  • Gene Type Coding gene
  • Location Chr3 : 10506110-10509067 : positive

Gene Family Information

  • ID HOM05D000340
  • #Genes/#Species 1384/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G28180.1
  • symbol CSLC04
  • Alias ATCSLC04,Cellulose-synthase-like C4,ATCSLC4,CSLC4,CELLULOSE-SYNTHASE LIKE C4
  • uniprot Q9LJP4

Descriptions

  • Description Cellulose-synthase-like C4
  • Computational description Cellulose-synthase-like C4 (CSLC04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5595 Blast hits to 5589 proteins in 1569 species: Archae - 192; Bacteria - 4449; Metazoa - 13; Fungi - 97; Plants - 511; Viruses - 16; Other Eukaryotes - 317 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071555
IEA
GOA Databasecell wall organization
GO:0071555
IMP
Gene Ontologycell wall organization1
GO:0099402
IMP
Gene Ontologyplant organ development1
GO:0048868
IMP
Gene Ontologypollen tube development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0016757
IMP
ISS, IBA
Gene Ontologyglycosyltransferase activity1 2
GO:0042803
IPI
Gene Ontologyprotein homodimerization activity3
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0016759
ISS
Gene Ontologycellulose synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
IDA
IEA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
ISM, IBA
Gene OntologyGolgi apparatus2 4
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005802
IDA
GOA Databasetrans-Golgi network
GO:0005802
HDA
Gene Ontologytrans-Golgi network5
GO:0005768
IDA
GOA Databaseendosome
GO:0005768
HDA
Gene Ontologyendosome5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0000138
HDA
Gene OntologyGolgi trans cisterna6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001173 Glycosyltransferase 2-like
IPR029044 Nucleotide-diphospho-sugar transferases
Mapman id Description
21.2.1.1.1 Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.1,4-beta-glucan synthase (CSLC)