Gene: AT3G27920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G27920
  • Transcript Identifier AT3G27920.1
  • Gene Type Coding gene
  • Location Chr3 : 10361945-10363506 : negative

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G27920.1
  • symbol MYB0
  • Alias ATGL1,ATMYB0,myb domain protein 0,GL1,GLABRA 1
  • uniprot P27900

Descriptions

  • Description myb domain protein 0
  • Computational description myb domain protein 0 (MYB0); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 23 (TAIR:AT5G40330.1); Has 9086 Blast hits to 8334 proteins in 551 species: Archae - 0; Bacteria - 0; Metazoa - 839; Fungi - 495; Plants - 5921; Viruses - 3; Other Eukaryotes - 1828 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010154
IMP
Gene Ontologyfruit development1
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0030154
IBA
Gene Ontologycell differentiation2
GO:0009740
TAS
Gene Ontologygibberellic acid mediated signaling pathway3
GO:2000039
IMP
Gene Ontologyregulation of trichome morphogenesis4
GO:0010026
IMP
Gene Ontologytrichome differentiation4
GO:0009867
IMP
Gene Ontologyjasmonic acid mediated signaling pathway4
GO:0032880
IMP
Gene Ontologyregulation of protein localization5
GO:0048629
IMP
Gene Ontologytrichome patterning6
GO:0001708
IMP
Gene Ontologycell fate specification6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding5
GO:0000976
IBA
Gene Ontologytranscription cis-regulatory region binding2
GO:0003700
ISS
TAS
Gene OntologyDNA-binding transcription factor activity3 7
GO:0005515
IPI
Gene Ontologyprotein binding8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
TAS
Gene Ontologynucleus2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)