Gene: AT3G27720

General Information

Structural Information

Species Arabidopsis thaliana
Gene Identifier AT3G27720
Transcript Identifier AT3G27720.1
Gene Type Coding gene
Location Chr3 : 10271876-10273621 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000554
#Genes/#Species 991/100
Phylogenetic origin

ID ORTHO05D002829
#Genes/#Species 259/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid AT3G27720.1
symbol ARI4
Alias ATARI4,ARABIDOPSIS ARIADNE 4
full_name ARIADNE 4
uniprot Q9LVW9

Descriptions

Description IBR domain containing protein

Computational description ARIADNE 4 (ARI4); FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G27710.1); Has 32545 Blast hits to 15678 proteins in 704 species: Archae - 69; Bacteria - 841; Metazoa - 14406; Fungi - 4057; Plants - 2094; Viruses - 825; Other Eukaryotes - 10253 (source: NCBI BLink).

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000209	IBA	Gene Ontology	protein polyubiquitination	1
GO:0006511	IBA	Gene Ontology	ubiquitin-dependent protein catabolic process	1
GO:0032436	IBA	Gene Ontology	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1
GO:0016567	IEA	GOA Database	protein ubiquitination
GO:0016567	IEA	InterPro	protein ubiquitination

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0031624	IBA	Gene Ontology	ubiquitin conjugating enzyme binding	1
GO:0061630	IBA	Gene Ontology	ubiquitin protein ligase activity	1
GO:0046872	IEA	GOA Database	metal ion binding
GO:0016740	IEA	GOA Database	transferase activity
GO:0004842	IEA	GOA Database	ubiquitin-protein transferase activity
GO:0004842	IEA	InterPro	ubiquitin-protein transferase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISM	Gene Ontology	nucleus
GO:0005737	IBA	Gene Ontology	cytoplasm	1
GO:0000151	IBA	Gene Ontology	ubiquitin ligase complex	1

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR031127	E3 ubiquitin ligase RBR family
IPR002867	IBR domain

Mapman id	Description
19.2.2.1.4.4.1	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Ariadne)