Gene: AT3G27220
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G27220
- Transcript Identifier AT3G27220.1
- Gene Type Coding gene
- Location Chr3 : 10051742-10053594 : negative
Gene Family Information
- ID HOM05D000772
- #Genes/#Species 762/96
- Phylogenetic origin
- ID ORTHO05D003239
- #Genes/#Species 236/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G27220.1
- uniprot Q9LK31
Descriptions
- Description Galactose oxidase/kelch repeat superfamily protein
- Computational description Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G51540.1); Has 1505 Blast hits to 1317 proteins in 198 species: Archae - 25; Bacteria - 276; Metazoa - 909; Fungi - 25; Plants - 115; Viruses - 52; Other Eukaryotes - 103 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009061 | IMP, IEP | Gene Ontology | anaerobic respiration | 1 |
| GO:0071456 | HEP | Gene Ontology | cellular response to hypoxia | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005794 | IDA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 3 |
| GO:0005768 | IDA | GOA Database | endosome | |
| GO:0005768 | HDA | Gene Ontology | endosome | 4 |
| GO:0005802 | IDA | GOA Database | trans-Golgi network | |
| GO:0005802 | HDA | Gene Ontology | trans-Golgi network | 4 |
| GO:0005797 | HDA | Gene Ontology | Golgi medial cisterna | 5 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015915 | Kelch-type beta propeller |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |