Gene: AT3G25160
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G25160
- Transcript Identifier AT3G25160.1
- Gene Type Coding gene
- Location Chr3 : 9160337-9162023 : negative
Gene Family Information
- ID HOM05D000628
- #Genes/#Species 906/100
- Phylogenetic origin
- ID ORTHO05D001121
- #Genes/#Species 480/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT3G25160.1
- uniprot Q5PNU5
Descriptions
- Description ER lumen protein retaining receptor family protein
- Computational description ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT4G38790.1); Has 889 Blast hits to 889 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 314; Fungi - 182; Plants - 232; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006621 | IEA | Gene Ontology | protein retention in ER lumen | |
| GO:0006621 | IEA | InterPro | protein retention in ER lumen | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046923 | IEA | Gene Ontology | ER retention sequence binding | |
| GO:0046923 | IEA | InterPro | ER retention sequence binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000133 | ER lumen protein retaining receptor |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |