Gene: AT3G25060

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G25060
  • Transcript Identifier AT3G25060.1
  • Gene Type Coding gene
  • Location Chr3 : 9128516-9130321 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G25060.1
  • Alias MEF25,mitochondrial RNA editing factor 25
  • uniprot Q9LJR6

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 38577 Blast hits to 13574 proteins in 230 species: Archae - 0; Bacteria - 4; Metazoa - 32; Fungi - 92; Plants - 37972; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
IBA
Gene OntologyRNA modification1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.30 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF25)