Gene: AT3G22220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G22220
  • Transcript Identifier AT3G22220.1
  • Gene Type Coding gene
  • Location Chr3 : 7839808-7842358 : negative

Gene Family Information

  • ID HOM05D000023
  • #Genes/#Species 5885/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G22220.1
  • uniprot Q9LIE1

Descriptions

  • Description hAT transposon superfamily
  • Computational description hAT transposon superfamily; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 845 Blast hits to 775 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 835; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012337 Ribonuclease H-like superfamily
IPR007021 Domain of unknown function DUF659
IPR008906 HAT, C-terminal dimerisation domain
Mapman id Description
35.1 not assigned.annotated