Gene: AT3G20160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G20160
  • Transcript Identifier AT3G20160.1
  • Gene Type Coding gene
  • Location Chr3 : 7038995-7040029 : positive

Gene Family Information

  • ID HOM05D000626
  • #Genes/#Species 914/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G20160.1
  • uniprot Q9LJY2

Descriptions

  • Description Terpenoid synthases superfamily protein
  • Computational description Terpenoid synthases superfamily protein; FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 6 (TAIR:AT1G49530.1); Has 16529 Blast hits to 16522 proteins in 2934 species: Archae - 341; Bacteria - 9383; Metazoa - 279; Fungi - 473; Plants - 472; Viruses - 12; Other Eukaryotes - 5569 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008299
IEA
Gene Ontologyisoprenoid biosynthetic process
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0016117
IEA
GOA Databasecarotenoid biosynthetic process
GO:0045337
IEA
Gene Ontologyfarnesyl diphosphate biosynthetic process
GO:0033386
IEA
Gene Ontologygeranylgeranyl diphosphate biosynthetic process
GO:0033384
IEA
Gene Ontologygeranyl diphosphate biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004311
IEA
GOA Databasefarnesyltranstransferase activity
GO:0004311
ISS, IBA
Gene Ontologyfarnesyltranstransferase activity1 2
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004659
IBA
Gene Ontologyprenyltransferase activity2
GO:0004161
IEA
Gene Ontologydimethylallyltranstransferase activity
GO:0004337
IEA
Gene Ontologygeranyltranstransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0009507
IDA
ISM
Gene Ontologychloroplast3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000092 Polyprenyl synthetase
IPR008949 Isoprenoid synthase domain superfamily
Mapman id Description
9.1.3.3 Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.isoprenyl diphosphate synthase (IDS)