Gene: AT3G18770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18770
  • Transcript Identifier AT3G18770.1
  • Gene Type Coding gene
  • Location Chr3 : 6460026-6462510 : negative

Gene Family Information

  • ID HOM05D002417
  • #Genes/#Species 280/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18770.1
  • uniprot F4J8V5

Descriptions

  • Description Autophagy-related protein 13
  • Computational description Autophagy-related protein 13; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: Autophagy-related protein 13 (TAIR:AT3G49590.1); Has 480 Blast hits to 395 proteins in 141 species: Archae - 0; Bacteria - 18; Metazoa - 72; Fungi - 154; Plants - 106; Viruses - 7; Other Eukaryotes - 123 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000045
IEA
GOA Databaseautophagosome assembly
GO:0000045
IEA
InterProautophagosome assembly
GO:0006914
IEA
GOA Databaseautophagy
GO:0006914
IEA
InterProautophagy
GO:0015031
IEA
GOA Databaseprotein transport
GO:0034727
IBA
Gene Ontologypiecemeal microautophagy of the nucleus1
GO:0000423
IBA
Gene Ontologymitophagy1
GO:0034497
IBA
Gene Ontologyprotein localization to phagophore assembly site1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005776
IEA
GOA Databaseautophagosome
GO:1990316
IEA
GOA DatabaseAtg1/ULK1 kinase complex
GO:1990316
IBA
Gene OntologyAtg1/ULK1 kinase complex1
GO:1990316
IEA
InterProAtg1/ULK1 kinase complex
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005634
ISM
Gene Ontologynucleus
GO:0005829
IBA
Gene Ontologycytosol1
GO:0019898
IBA
Gene Ontologyextrinsic component of membrane1
GO:0000407
IBA
Gene Ontologyphagophore assembly site1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018731 Autophagy-related protein 13, N-terminal
IPR036570 HORMA domain superfamily
IPR040182 Autophagy-related protein 13
Mapman id Description
19.3.1.2 Protein homeostasis.autophagy.initiation complex.accessory component ATG13