Gene: AT3G18140

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18140
  • Transcript Identifier AT3G18140.1
  • Gene Type Coding gene
  • Location Chr3 : 6212743-6214567 : negative

Gene Family Information

  • ID HOM05D004736
  • #Genes/#Species 155/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18140.1
  • symbol LST8-1
  • full_name Lethal with Sec Thirteen 8-1
  • uniprot Q9LV27

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Computational description Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G22040.1); Has 76534 Blast hits to 29814 proteins in 808 species: Archae - 88; Bacteria - 10199; Metazoa - 30987; Fungi - 16399; Plants - 9158; Viruses - 0; Other Eukaryotes - 9703 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900091
IMP
Gene Ontologyregulation of raffinose biosynthetic process1
GO:0031929
IBA
IEA
Gene OntologyTOR signaling2
GO:0031929
IEA
InterProTOR signaling
GO:0040008
IEA
GOA Databaseregulation of growth
GO:0032956
IBA
Gene Ontologyregulation of actin cytoskeleton organization2
GO:1900088
IMP
Gene Ontologyregulation of inositol biosynthetic process1
GO:0048571
IMP
Gene Ontologylong-day photoperiodism1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031932
IBA
IEA
Gene OntologyTORC2 complex2
GO:0031932
IEA
InterProTORC2 complex
GO:0031931
IBA
IEA
Gene OntologyTORC1 complex2
GO:0031931
IEA
InterProTORC1 complex
GO:0005768
IEA
GOA Databaseendosome
GO:0005768
IDA
Gene Ontologyendosome1
GO:0005634
ISM
Gene Ontologynucleus
GO:0016020
IDA
Gene Ontologymembrane1
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex4
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037588 Target of rapamycin complex subunit LST8
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
27.10.1.3 Multi-process regulation.TOR (Target Of Rapamycin) signalling.TORC complex.regulatory component LST8