Gene: AT3G16870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G16870
  • Transcript Identifier AT3G16870.1
  • Gene Type Coding gene
  • Location Chr3 : 5763752-5764576 : negative

Gene Family Information

  • ID HOM05D000947
  • #Genes/#Species 633/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G16870.1
  • symbol GATA17
  • uniprot Q9LIB5

Descriptions

  • Description GATA transcription factor 17
  • Computational description GATA transcription factor 17 (GATA17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT4G16141.1); Has 1542 Blast hits to 1508 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 622; Plants - 726; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISS
IEA
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0030154
IBA
Gene Ontologycell differentiation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding3
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000679 Zinc finger, GATA-type
IPR013088 Zinc finger, NHR/GATA-type
Mapman id Description
15.5.1.3.1 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA)